The only way to properly adjust the saddle height is to measure the string clearances at the 12th fret and do some math. Bryan Kimsey has a section on his website about this.
When I fit a new saddle . . . or modify an old one, I seldom just sand off the bottom. After adjusting for very slight neck relief and checking for high frets, I take string height measurements with a machinist's caliper at the 12th fret. I usually find that the saddle profile needs to be changed. (Saddles are often too high in the middle to just sand the bottom.) I wind up filing down the top of the saddle to accomplish specific heights at each string position and then I re-shape it to restore the compensation and create a smooth edge where each string breaks over. I Shoot for .100", .094", .088", .082", .076" and .070" clearance at the twelfth fret from bass to treble. Whatever the individual string height needs to change at the 12th means the saddle height at that position needs to change twice as much. For example, if I want to lower a string by .005" at the 12th, I need to take .010 off the saddle in that position. When I'm done, if I find a slight buzz when the guitar is played aggressively, I just add a smidgen of neck relief. (If I blow it completely, bone saddle blanks are less than $10.) Yes, it's a little OCD, but the results are worth it. If you don't feel comfortable that you can take the measurements and do the work, then take your guitar to someone who can do it. Factory fitted saddles are not always even close to being shaped right. Buying a new saddle only based on the old one assumes that the old one was close to being correct to begin with . . . which is a BIG assumption.